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GGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattattactactagaaattattctgtaagttgtgtgcatgttattgcattgggttcttttgcatctgtcatctgctagagcagtgttgcaggtct...
species | Oryza sativa |
transcript | LOC_Os02g50360.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAG CTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGEST: gi|58601138|gb|CK011666.1|CK011666
genomic: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattat ... tgatatgcagCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGG
EST: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAG CTTGTTTTTGCTGTTTTCAATGGTGAAGCCTEST: gi|29677315|gb|CB673590.1|CB673590
genomic: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattat ... tgatatgcagCTTGTTTTTGCTGTTTTCAATGGTGAAGCCT
EST: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAG CTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGEST: gi|58673433|gb|CK062119.1|CK062119
genomic: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattat ... tgatatgcagCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGG
EST: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAG CTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGEST: gi|88827251|gb|CI777816.1|CI777816
genomic: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattat ... tgatatgcagCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGG
EST: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAG CTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGG
genomic: CTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattat ... tgatatgcagCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGgtaagattattactactagaaattattctgtaagttgtgtgcatgttattgcattgggttcttttgcatctgtcatctgctagagcagtgttgcaggtct
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