Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58686077|gb|CK074764.1|CK074764EST: TGGACGAAGAAG TTTACTCCCCAGAGAGGGGGGACATTTGAGATTGTTTTTGTTTCACCAACT
genomic: TGGACGAAGAAGgttcgagacg ... tctattgtagTTTACTCCCCAGAGAGGGGGGAGATTTGAGATTGTTTTTGTTTCACCAACT
EST:
gi|33684770|gb|CF313009.1|CF313009EST: GGTGGTGTCCGTGGAGATGCCGGCGCCGGAGGGGTGGACGAAGAAG TTTACTCCCCAGAGAGGGGGGAGATTTGAGATTGTTTTTGTTTCACCAACT
genomic: GGTGGTGTCCGTGGAGATGCCGGCGCCGGAGGGGTGGACGAAGAAGgttcgagacg ... tctattgtagTTTACTCCCCAGAGAGGGGGGAGATTTGAGATTGTTTTTGTTTCACCAACT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCAGCAGGCGGCGGCGGCGCAGACGGCGGAGGTGACGGAGGCGGCGGCGAAGGAGGTGGTGTCCGTGGAGATGCCGGCGCCGGAGGGGTGGACGAAGAAGgttcgagacgagataatagctaagctttggtttcaactgctgctttaattcggttgctgttttgcttttgttatgcttcgcttcgattttgcgtcgaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG