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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcctcccctcctcatcctccaatccccgcttcgattcagattttgcctccgctccgtgtccgcaatccgccattagttgttagtgagctagctg...

Basic information

species Oryza sativa
transcript LOC_Os12g07010.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88312893|gb|CI589989.1|CI589989
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGTGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATTG
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAG-GAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCAT-G
EST: gi|88395152|gb|CI609468.1|CI609468
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|66914330|gb|CX101178.1|CX101178
EST:     GCGCCGCCGCCGCTGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88390948|gb|CI592856.1|CI592856
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|86905124|gb|CI289271.1|CI289271
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|325494465|gb|JG458989.1|JG458989
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88372200|gb|CI641835.1|CI641835
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|2312169|gb|C28324.1|C28324
EST:     CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGN
genomic: CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88733563|gb|CI756740.1|CI756740
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88395616|gb|CI613138.1|CI613138
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88370339|gb|CI587729.1|CI587729
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|14192324|gb|AU184535.1|AU184535
EST:     CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|55441387|gb|CV734012.1|CV734012
EST:     ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88390937|gb|CI592845.1|CI592845
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33657387|gb|CF280001.1|CF280001
EST:     GCACTCATTTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88743420|gb|CI766928.1|CI766928
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|58652963|gb|CK041643.1|CK041643
EST:     GTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88720142|gb|CI745232.1|CI745232
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88765484|gb|CI774578.1|CI774578
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88744369|gb|CI767729.1|CI767729
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88731136|gb|CI754749.1|CI754749
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|29660813|gb|CB657088.1|CB657088
EST:     GCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88394710|gb|CI622584.1|CI622584
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88762154|gb|CI771710.1|CI771710
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88696089|gb|CI739664.1|CI739664
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|29680798|gb|CB677073.1|CB677073
EST:     GCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33682543|gb|CF310782.1|CF310782
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|86596691|gb|CI286604.1|CI286604
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|218493886|gb|FG946859.1|FG946859
EST:     CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88664910|gb|CI705095.1|CI705095
EST:     TCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88718874|gb|CI742384.1|CI742384
EST:     TCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88423868|gb|CI609899.1|CI609899
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|86829978|gb|CI288635.1|CI288635
EST:     CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|58611003|gb|CK038715.1|CK038715
EST:     GTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCAGCCGAGGCATGGA
genomic: GTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88355874|gb|CI625503.1|CI625503
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88454288|gb|CI567870.1|CI567870
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88427383|gb|CI569421.1|CI569421
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88309781|gb|CI656522.1|CI656522
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88324585|gb|CI568204.1|CI568204
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88406679|gb|CI603873.1|CI603873
EST:     TCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88577866|gb|CI674476.1|CI674476
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88739602|gb|CI763110.1|CI763110
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88419678|gb|CI686582.1|CI686582
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88454287|gb|CI567869.1|CI567869
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGGCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88317069|gb|CI625706.1|CI625706
EST:     ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88725884|gb|CI747396.1|CI747396
EST:     ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88717484|gb|CI740994.1|CI740994
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|25800612|gb|CA756573.1|CA756573
EST:     CGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33655921|gb|CF278535.1|CF278535
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88761424|gb|CI770980.1|CI770980
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88411901|gb|CI571393.1|CI571393
EST:     ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88695593|gb|CI737631.1|CI737631
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88402722|gb|CI613170.1|CI613170
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88401892|gb|CI591219.1|CI591219
EST:     CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88312892|gb|CI589988.1|CI589988
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAATGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88337671|gb|CI632173.1|CI632173
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88735559|gb|CI759067.1|CI759067
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCANTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88406303|gb|CI596430.1|CI596430
EST:     GCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88340723|gb|CI657215.1|CI657215
EST:     ACTCAGCTC-CGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88358123|gb|CI605048.1|CI605048
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|58677050|gb|CK065737.1|CK065737
EST:     GCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88383971|gb|CI631861.1|CI631861
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGNCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88732239|gb|CI757087.1|CI757087
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88445408|gb|CI584521.1|CI584521
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33810802|gb|CF331292.1|CF331292
EST:     TCTGCACTCAGCT--CG-CGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33661294|gb|CF292261.1|CF292261
EST:     CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGGAAGATGTCGCACA
genomic: CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGG-AAGATGTCGCACA
EST: gi|88350556|gb|CI630074.1|CI630074
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88370976|gb|CI595088.1|CI595088
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|58676227|gb|CK064914.1|CK064914
EST:     CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88371166|gb|CI597643.1|CI597643
EST:     ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33657789|gb|CF280403.1|CF280403
EST:     CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33685860|gb|CF314099.1|CF314099
EST:     CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88345814|gb|CI631082.1|CI631082
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88826885|gb|CI777450.1|CI777450
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88723863|gb|CI745560.1|CI745560
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88726616|gb|CI750271.1|CI750271
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|117251520|gb|CT844200.1|CT844200
EST:     CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88730344|gb|CI753957.1|CI753957
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|86885651|gb|CI309778.1|CI309778
EST:     CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|33689745|gb|CF317984.1|CF317984
EST:     GCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: GCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88392720|gb|CI623951.1|CI623951
EST:     ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: ACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88735923|gb|CI757498.1|CI757498
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|86905580|gb|CI287145.1|CI287145
EST:     CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTTAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88429140|gb|CI690027.1|CI690027
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|2310294|gb|C26449.1|C26449
EST:     CAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: CAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|58664864|gb|CK053550.1|CK053550
EST:     TCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88745247|gb|CI768607.1|CI768607
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88345499|gb|CI629760.1|CI629760
EST:     TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCNACCGAGGCATGGA
genomic: TCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
EST: gi|88736351|gb|CI759859.1|CI759859
EST:     TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAG                         GTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA
genomic: TGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 36 (upstream exon), 71 (downstream exon)
Score: 58

GCCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcct ... tcgtttgcagGTAAGGAGGAGGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCATGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCCTCTGCACTCAGCTCGCGCCGCCGCCGCCGTCGCCGTCACTCTCCTCAGgtaagctcctcccctcctcatcctccaatccccgcttcgattcagattttgcctccgctccgtgtccgcaatccgccattagttgttagtgagctagctg

- - - - - TCAGCT
- - - - -  CAGCTC
- - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catcctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tccccgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctccgc