1 5' 3' | 2 5' 3' | 3 5' 3' |
TCTTCTCTCTCTACTACTTCTCCTCCTCCTCCTTCCTCGCCGATCCTCGCCGCCGCCGCCGCGCATCGCCGGAGCAATCTCCATTGACAAGAGCGgtaagtagagtatctctagcttctgcttgggttggattctcctcccaattcccatatattcgcttattatgtggaaaaggctttgggaagaagaagaaga...
species | Oryza sativa |
transcript | LOC_Os11g36070.7 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCGCCGCCGCGCATCGCCGGAGCAATCTCCATTGACAAGAGCG GTATAGGTTGGTGAGGAGGGGAGCTAGAGCTTGATGGTGGCGGCCATGGAGEST: gi|117228387|gb|CT846429.1|CT846429
genomic: GCCGCCGCCGCGCATCGCCGGAGCAATCTCCATTGACAAGAGCGgtaagtagag ... gtgaatgaagGTATAGGTTGGTGAGGAGGGGAGCTAGAGCTTGATGGTGGCGGCCATGGAG
EST: GAGCAATCTCCATTGACAAGAGCG GTATAGGTTGGTGAGGAGGGGAGCTAGAGCTTGATGGTGGCGGCCATGGAG
genomic: GAGCAATCTCCATTGACAAGAGCGgtaagtagag ... gtgaatgaagGTATAGGTTGGTGAGGAGGGGAGCTAGAGCTTGATGGTGGCGGCCATGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTTCTCTCTCTACTACTTCTCCTCCTCCTCCTTCCTCGCCGATCCTCGCCGCCGCCGCCGCGCATCGCCGGAGCAATCTCCATTGACAAGAGCGgtaagtagagtatctctagcttctgcttgggttggattctcctcccaattcccatatattcgcttattatgtggaaaaggctttgggaagaagaagaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA