Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88504157|gb|CI431663.1|CI431663EST: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAG ATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
genomic: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAGgtgtcatatc ... ttgcttctagATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
EST:
gi|88472921|gb|CI410192.1|CI410192EST: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAG ATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
genomic: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAGgtgtcatatc ... ttgcttctagATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
EST:
gi|88476957|gb|CI414228.1|CI414228EST: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAG ATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
genomic: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAGgtgtcatatc ... ttgcttctagATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
EST:
gi|88510054|gb|CI437560.1|CI437560EST: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAG ATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
genomic: CATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAGgtgtcatatc ... ttgcttctagATGGCAGCTCGTTGGTGTATAACAAGATGATTGCACCTATGGTAGAAGATT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTCTTTTCATGGTCTACCTCAGGTCGATGCAGAGCAGAAAGGTGTTGGATCATTGGCCCCCTGCTGACATCTTCCCTTACTCAAGCTTATAAATTGCAAGgtgtcatatcctctttagactgaccaaattatttttgtaataagttgtcagattattttatctttttacacatgattcaattttgaagtggtatgtggtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT