Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88326497|gb|CI659931.1|CI659931EST: CCTCCTCACCAACGGCCAGTGCTGCTGGCGCGCCGTCCCCAAGCTCGCCG GGCTTCTCCGGTGCGGGAAGAGCTGCAGGCTACGGTGGACGAACTACCTCC
genomic: CCTCCTCACCAACGGCCAGTGCTGCTGGCGCGCCGTCCCCAAGCTCGCCGgtgcgtcgat ... aaaattatagGGCTTCTCCGGTGCGGGAAGAGCTGCAGGCTACGGTGGACGAACTACCTCC
EST:
gi|88344286|gb|CI655680.1|CI655680EST: CCTCCTCACCAACGGCCAGTGCTGCTGGCGCGCCGTCCCCAAGCTCGCCG GGCTTCTCCGGTGCGGGAAGAGCTGCAGGCTACGGTGGACGAACTACCTCC
genomic: CCTCCTCACCAACGGCCAGTGCTGCTGGCGCGCCGTCCCCAAGCTCGCCGgtgcgtcgat ... aaaattatagGGCTTCTCCGGTGCGGGAAGAGCTGCAGGCTACGGTGGACGAACTACCTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGAAGAAGGGGCCATGGACGGCGGAGGAGGACCAGAAGCTCATCACCTTCCTCCTCACCAACGGCCAGTGCTGCTGGCGCGCCGTCCCCAAGCTCGCCGgtgcgtcgatcgagatcctcgtgtcgcagtactactttatgtgtgttttggctatgtgcatcctacgatcgaggccgaaagtttatatactttcattgtctgaaaaagggtatgtttgtaataaaattatag
- - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT