Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29644294|gb|CB649301.1|CB649301EST: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGG CTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
genomic: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacct ... ttacgtgcagCTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
EST:
gi|29668046|gb|CB664321.1|CB664321EST: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGG CTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
genomic: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacct ... ttacgtgcagCTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
EST:
gi|58593268|gb|CF991576.1|CF991576EST: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGG CTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
genomic: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacct ... ttacgtgcagCTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
EST:
gi|88763642|gb|CI773089.1|CI773089EST: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGG CTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
genomic: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacct ... ttacgtgcagCTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
EST:
gi|29679145|gb|CB675420.1|CB675420EST: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGG CTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
genomic: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacct ... ttacgtgcagCTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
EST:
gi|29629414|gb|CB634423.1|CB634423EST: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGG CTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
genomic: ACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacct ... ttacgtgcagCTGGACGACTGGGTGCTCTGCCGGATCTACAAGAAGTCCGGCCAGGCGTCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GATCATGCACGAGTACCGCCTCGCCGCCGACCCTCTCGCCGCCGCCGCAAACACCTACAAGCCCTCCTCCTCCTCCCGATTCCGCAACGTCTCCATGAGGgtatgtacctactcatacgccatcgccaattcgccatgaccaccatctctgagcttaactactaactgcatatccatccatctcctcatgccacttgcgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC