1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGGCCTCCACTTCTTCAACCCGTTCGCCGGCGAGTTCGTCGCCGGGACGCTCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttctcggtcacgctacctcgcgagtttcttctgtttgttttggatttctagtgtagcccccatggccattatccaatgttaaggttcaatact...
species | Oryza sativa |
transcript | LOC_Os06g04460.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAG GATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAGEST: gi|88717541|gb|CI741051.1|CI741051
genomic: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttc ... tcccctgcagGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAG
EST: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAG GATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAGEST: gi|88351724|gb|CI617449.1|CI617449
genomic: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttc ... tcccctgcagGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAG
EST: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAG GATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAGEST: gi|88589982|gb|CI708803.1|CI708803
genomic: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttc ... tcccctgcagGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAG
EST: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAG GATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATAEST: gi|218496061|gb|FG945877.1|FG945877
genomic: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttc ... tcccctgcagGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATA
EST: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAG GATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAG
genomic: TCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttc ... tcccctgcagGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGCCTCCACTTCTTCAACCCGTTCGCCGGCGAGTTCGTCGCCGGGACGCTCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAAGgtttcccttctcggtcacgctacctcgcgagtttcttctgtttgttttggatttctagtgtagcccccatggccattatccaatgttaaggttcaatact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agccccc