Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58687901|gb|CK076588.1|CK076588EST: GCTCATCACCTTCCTCGACCTCTACCGCTTCGACCCATGGGAGCTCCCCG CAATGGCGGTGATTGGGGAGAAGGAGTGGTTCTTCTACGTGCCGCGGGACC
genomic: GCTCATCACCTTCCTCGACCTCTACCGCTTCGACCCATGGGAGCTCCCCGgtacacacat ... cgtgcgtcagCAATGGCGGTGATAGGGGAGAAGGAGTGGTTCTTCTACGTGCCGCGGGACC
EST:
gi|58593793|gb|CF992101.1|CF992101EST: CCCATGGGAGCTCCCCG CAATGGCGGTGATTGGGGAGAAGGAGTGGTTCTTCTACGTGCCGCGGGACC
genomic: CCCATGGGAGCTCCCCGgtacacacat ... cgtgcgtcagCAATGGCGGTGATAGGGGAGAAGGAGTGGTTCTTCTACGTGCCGCGGGACC
EST:
gi|29644355|gb|CB649362.1|CB649362EST: GCTCATCACCTTCCTCGACCTCTACCGCTTCGACCCATGGGAGCTCCCCG CAATGGCGGTGATAGGGGAGAAGGAGTGGTTCTTCTACGTGCCGCGGGACC
genomic: GCTCATCACCTTCCTCGACCTCTACCGCTTCGACCCATGGGAGCTCCCCGgtacacacat ... cgtgcgtcagCAATGGCGGTGATAGGGGAGAAGGAGTGGTTCTTCTACGTGCCGCGGGACC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCGAGTTCTACCTCCGGCGGAAGGTGGAGGGCCGGCGGTTCAACGTCGAGCTCATCACCTTCCTCGACCTCTACCGCTTCGACCCATGGGAGCTCCCCGgtacacacatcacacataattaagctaattaaattaagctgataattagttaatttggtgatcgatcgatctgtggttgtgcgtgcgtcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT