1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAAGGGCGGCGCCGCTGCCGCCGGCGGCGGGCTCACCGTCGAGGGCTTCCACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtacttaatttacgtgattagttagctaattaaactcgtaattaacacctaattaatcatgattatgcatggattcgacgatctcttcctccatca...
species | Oryza sativa |
transcript | LOC_Os05g03610.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGG GTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGEST: gi|88298636|gb|CI563631.1|CI563631
genomic: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtactt ... atgggtgcagGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGG
EST: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGG GTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGEST: gi|58611545|gb|CK039257.1|CK039257
genomic: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtactt ... atgggtgcagGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGG
EST: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGG GTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTEST: gi|29645313|gb|CB650320.1|CB650320
genomic: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtactt ... atgggtgcagGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCT
EST: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGG GTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGEST: gi|29623942|gb|CB628953.1|CB628953
genomic: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtactt ... atgggtgcagGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGG
EST: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGG GTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGEST: gi|29614363|gb|CB619376.1|CB619376
genomic: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtactt ... atgggtgcagGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGG
EST: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGG GTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGG
genomic: ACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtactt ... atgggtgcagGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGGGCGGCGCCGCTGCCGCCGGCGGCGGGCTCACCGTCGAGGGCTTCCACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGgtacgtacttaatttacgtgattagttagctaattaaactcgtaattaacacctaattaatcatgattatgcatggattcgacgatctcttcctccatca
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