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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGCGCTGGCTCCCTGGGATCCTCCGCCGAGGGGACGGGCTCGCGCGGCGCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccgtgcccggtgcccccaccgccgccttcccctcccattgttaacccctccgccgcgccggaatcgtgcgtgctcatggctggatgtatatgttgtgcag

Basic information

species Oryza sativa
transcript LOC_Os05g03480.4
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g03480.2 (Oryza sativa), 5'ss of exon 1
lower sequence: GRMZM2G052630_T02 (Zea mays), 5'ss of exon 1
GCAGCGCTGGCTCCCTGGGATCCTCCGCCGAGGGG-ACGGGCTCGCGCGGCGCCTCTACTCCTC--CGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccgtgcccggtgcccccaccgccgccttc------ccctcccattgttaacccctccgccgcgccggaatcgtgcgtgctcatggctggatgtatatgttgtgcag
   ||| |||||||| | | |||||||||| |  |  |  |   ||| |||| | |  ||| ||  | | ||||||||||||||||||||||| ||||||||||| |||  || || || |  ||  ||     |  ||      |||  ||    ||  ||| | | |   ||| || |||  |    || ||||  |   | |           
---GCGGTGGCTCCCGGCGCTCCTCCGCCGCGCCGCGCCCGGCGGCGGGGCGGCGCGGCTCTTCGCCTCGTCCTCCCTCCTCTTCGACGACACGCAGGAGCAGgtgcgttacgcgctcgctcacctaacttttccactcggcgggcccaaccgccattgccccttgcccgttgcctga-tcgacccaattcctggcccgccctctgccag------

upper sequence: LOC_Os05g03480.2 (Oryza sativa), 5'ss of exon 1
lower sequence: GRMZM2G381051_T03 (Zea mays), 5'ss of exon 2
GCAGCGCTGGCTCCCTGGGATCCTCCGCCGAGGGG-ACGGGCTCGCGCGGCGCCTCTACTCCTC--CGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccgtgcccggtgcccccaccgccgccttccc----ctcccattgttaacccctccgccgcgccggaatcgtgcgtgctcatggctggatgtatatgttgtgcag---------
   ||| |||||||| | | |||||||||| | ||  |  |   |||  ||| | |  ||||||  | | ||||||||||||||||||||||| ||||||||||| |||   | || || |  | ||||  ||  ||   |    |  ||    ||   ||   | ||  ||| || |||  |    || | ||  |         |||  |           
---GCGGTGGCTCCCGGCGCTCCTCCGCCGCGCGGCGCCCGGCGGCGGCGCGGCGCGGCTCCTCGCCACGTCCTCCCTCCTCTTCGACGACACGCAGGAGCAGgtgcgtcatgcgctcgctctctccacttcccactcggcgggcccgccgccattgcgcctcgccccatgcctga-tcgacccaattcctcgcccgcccgcccccttgcaccccgccgccag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88340262|gb|CI652611.1|CI652611
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCNTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58652483|gb|CK041163.1|CK041163
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCGGCGC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGC-ACGC
EST: gi|58653569|gb|CK042249.1|CK042249
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29667480|gb|CB663755.1|CB663755
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|86904833|gb|CI310626.1|CI310626
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29665694|gb|CB661969.1|CB661969
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88411765|gb|CI571257.1|CI571257
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAA-GAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58675201|gb|CK063888.1|CK063888
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29661037|gb|CB657312.1|CB657312
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29678947|gb|CB675222.1|CB675222
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29637530|gb|CB642539.1|CB642539
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88307322|gb|CI641961.1|CI641961
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88336325|gb|CI648912.1|CI648912
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGCTTCGCGCAGGAGACCATCGCCCCCGCACG
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAG-TTCGCGCAGGAGACCATCGCCCC-GCACG
EST: gi|29661524|gb|CB657799.1|CB657799
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29668355|gb|CB664630.1|CB664630
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29642007|gb|CB647014.1|CB647014
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29664861|gb|CB661136.1|CB661136
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88346171|gb|CI634044.1|CI634044
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29661039|gb|CB657314.1|CB657314
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88760058|gb|CI769614.1|CI769614
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88308464|gb|CI650873.1|CI650873
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACANCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGAACATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|86849914|gb|CI301777.1|CI301777
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29669233|gb|CB665508.1|CB665508
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88578792|gb|CI687743.1|CI687743
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29663795|gb|CB660070.1|CB660070
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29637231|gb|CB642240.1|CB642240
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29642660|gb|CB647667.1|CB647667
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29642658|gb|CB647665.1|CB647665
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29671620|gb|CB667895.1|CB667895
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88581431|gb|CI698420.1|CI698420
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGAACATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29670746|gb|CB667021.1|CB667021
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29664640|gb|CB660915.1|CB660915
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58655315|gb|CK043995.1|CK043995
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29659705|gb|CB655980.1|CB655980
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88333339|gb|CI642376.1|CI642376
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29681462|gb|CB677737.1|CB677737
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58666277|gb|CK054963.1|CK054963
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29682069|gb|CB678344.1|CB678344
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|13536847|gb|AU181069.1|AU181069
EST:     GCTTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29666865|gb|CB663140.1|CB663140
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29623029|gb|CB628040.1|CB628040
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29680931|gb|CB677206.1|CB677206
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29657680|gb|CB653955.1|CB653955
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29664203|gb|CB660478.1|CB660478
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29674433|gb|CB670708.1|CB670708
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCCAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88382840|gb|CI682734.1|CI682734
EST:     GCCTCTACTCCTCCGNCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88739439|gb|CI762947.1|CI762947
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88314900|gb|CI609959.1|CI609959
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88377859|gb|CI637993.1|CI637993
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88732013|gb|CI757190.1|CI757190
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29661262|gb|CB657537.1|CB657537
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29614820|gb|CB619833.1|CB619833
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29643545|gb|CB648552.1|CB648552
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58689911|gb|CK078598.1|CK078598
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29658881|gb|CB655156.1|CB655156
EST:     CTTCGACGACACCCCTTAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: CTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29657355|gb|CB653630.1|CB653630
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|86877274|gb|CI311514.1|CI311514
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88386260|gb|CI572877.1|CI572877
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88339963|gb|CI649220.1|CI649220
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88371967|gb|CI681483.1|CI681483
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88346221|gb|CI634094.1|CI634094
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29675356|gb|CB671631.1|CB671631
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29672429|gb|CB668704.1|CB668704
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCATGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29664256|gb|CB660531.1|CB660531
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29661229|gb|CB657504.1|CB657504
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88826372|gb|CI776937.1|CI776937
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29641738|gb|CB646745.1|CB646745
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29658317|gb|CB654592.1|CB654592
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29668395|gb|CB664670.1|CB664670
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|25800055|gb|CA756016.1|CA756016
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88741680|gb|CI765188.1|CI765188
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88325041|gb|CI646455.1|CI646455
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29680249|gb|CB676524.1|CB676524
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88592488|gb|CI710593.1|CI710593
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGANGAAACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58689966|gb|CK078653.1|CK078653
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29637190|gb|CB642199.1|CB642199
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88372050|gb|CI641685.1|CI641685
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|33654177|gb|CF276791.1|CF276791
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88765057|gb|CI774175.1|CI774175
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88308255|gb|CI649470.1|CI649470
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58591759|gb|CF990067.1|CF990067
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29680494|gb|CB676769.1|CB676769
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88411776|gb|CI571268.1|CI571268
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAA-GAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29641375|gb|CB646382.1|CB646382
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|88312706|gb|CI587614.1|CI587614
EST:     GCCTCTACTCCTC-GCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGTGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|58671620|gb|CK060306.1|CK060306
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29658029|gb|CB654304.1|CB654304
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
EST: gi|29661171|gb|CB657446.1|CB657446
EST:     GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAG                         TTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC
genomic: GCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 60 (upstream exon), 57 (downstream exon)
Score: 52

GCAGCGCTGGCTCCCTGGGATCCTCCGCCGAGGGGACGGGCTCGCGCGGCGCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccg ... tgttgtgcagTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCCGCCGCCATCGACGCCTCCAACCATTTCCCCAAGGACGTCAACCTCTGGA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCAGCGCTGGCTCCCTGGGATCCTCCGCCGAGGGGACGGGCTCGCGCGGCGCCTCTACTCCTCCGCCTCCTCCCTCCTCTTCGACGACACCCAGGAGCAGgttcgtgccgtgcccggtgcccccaccgccgccttcccctcccattgttaacccctccgccgcgccggaatcgtgcgtgctcatggctggatgtatatgttgtgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG