1 5' 3' |
GCCCACCCGCAGCAGGCTTCTTCCTTCTACCCGACCGCCGCCGCCGCCGCCTCCTCGCCGTCCGACCAGCTCGCCGCCGCCGCCGCTGCCGAAGAGCAAGgtaccagctgatccattcaccgcacaagtaaattcctctctctcaccgcgccgcgtgccacgccccgattgcgaaagcatggcacgcgcgagcgcgccat...
species | Oryza sativa |
transcript | LOC_Os04g32620.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCCACCCGCAGCAGGCTTCTTCCTTCTACCCGACCGCCGCCGCCGCCGCCTCCTCGCCGTCCGACCAGCTCGCCGCCGCCGCCGCTGCCGAAGAGCAAGgtaccagctgatccattcaccgcacaagtaaattcctctctctcaccgcgccgcgtgccacgccccgattgcgaaagcatggcacgcgcgagcgcgccat
- - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccgcgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acgcccc