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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTCTGAAGTAGTACGCGCCGCTACCCTGCCTCTTCTTCCTTCCCACTACCAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatctttctttgtattttccttcactggtttgattctttgcttgtttgggatcatgtttaggtttcttgttggatttggtactgatctcgttaggtttcttggcccgtttccag

Basic information

species Oryza sativa
transcript LOC_Os03g58040.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88428464|gb|CI564932.1|CI564932
EST:     ATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: ATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|86904378|gb|CI308588.1|CI308588
EST:     GTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: GTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88733517|gb|CI756694.1|CI756694
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|33657939|gb|CF280553.1|CF280553
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88359789|gb|CI622479.1|CI622479
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|29679310|gb|CB675585.1|CB675585
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88352374|gb|CI615628.1|CI615628
EST:     CAAACCCGACCAAATATTGTATTGGTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGGGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88314615|gb|CI606683.1|CI606683
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88764543|gb|CI773661.1|CI773661
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|58609006|gb|CK037039.1|CK037039
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGAATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|58686901|gb|CK075588.1|CK075588
EST:     AAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTGCGTCGAACAGAATGAATGCGTTGGCAGCG
genomic: AAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88453274|gb|CI565716.1|CI565716
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|66915471|gb|CX102319.1|CX102319
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88405772|gb|CI609671.1|CI609671
EST:     ATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: ATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88364791|gb|CI614409.1|CI614409
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88731695|gb|CI755308.1|CI755308
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88740721|gb|CI764229.1|CI764229
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|86850168|gb|CI305407.1|CI305407
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88362637|gb|CI608786.1|CI608786
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88377000|gb|CI597784.1|CI597784
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88351099|gb|CI623321.1|CI623321
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88763819|gb|CI773235.1|CI773235
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|58607484|gb|CK035517.1|CK035517
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGAATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|29673988|gb|CB670263.1|CB670263
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|163920153|gb|EG712059.1|EG712059
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|29674431|gb|CB670706.1|CB670706
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|33658195|gb|CF280809.1|CF280809
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCTGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88739232|gb|CI762740.1|CI762740
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88390621|gb|CI609246.1|CI609246
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88391115|gb|CI593023.1|CI593023
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88364580|gb|CI612395.1|CI612395
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88359878|gb|CI617789.1|CI617789
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGGG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88763881|gb|CI773297.1|CI773297
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88733039|gb|CI756216.1|CI756216
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88357487|gb|CI623541.1|CI623541
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88370806|gb|CI592572.1|CI592572
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88735940|gb|CI757515.1|CI757515
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88404005|gb|CI601415.1|CI601415
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGTTGCTTGGGAAGATAAAA                         GTGGGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|88316149|gb|CI620427.1|CI620427
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG
EST: gi|58657687|gb|CK046367.1|CK046367
EST:     CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAA                         GTGCGGCTCTGAAGGGGAATTTCGTCGAACAGAATGAATGCGTTGGCAGCG
genomic: CAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 40

ACTCTGAAGTAGTACGCGCCGCTACCCTGCCTCTTCTTCCTTCCCACTACCAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatcttt ... ccgtttccagGTGCGGCTCTGAAGGGGAATTTCGTCGAACAGGATGAATGCGTTGGCAGCGACGAGCAGGAACTTCAAGCAGGCGGCCAAGCTGCTGGGCCTGGACTCCA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACTCTGAAGTAGTACGCGCCGCTACCCTGCCTCTTCTTCCTTCCCACTACCAAACCCGACCAAATATTGTATTGCTGGCTCGCTGCTTGGGAAGATAAAAgtaaatctttctttgtattttccttcactggtttgattctttgcttgtttgggatcatgtttaggtttcttgttggatttggtactgatctcgttaggtttcttggcccgtttccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA