1 5' 3' | 2 5' 3' | 3 5' 3' |
CTGCCAAACTGATGGACAACCTTCAGGTGAGCAACCCACATAGGCTGATAAGCTCATTCTGCCTCACACTTCTTCCATGGCCACAGAAACAGCTAGCCAGgtaggacaccagcattttcctgtttgccaacattttattcagctttcactgatgtagctaatatatttgttgtcacttcctgtag
species | Oryza sativa |
transcript | LOC_Os02g27594.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTCTTCCATGGTCACAGAAACAGCTAGCCAG ATGAAAGAAACTGTATCTGCGTGGTGCTAAAAAAGAAAAGEST: gi|13896996|gb|AU183332.1|AU183332
genomic: CTTCTTCCATGGCCACAGAAACAGCTAGCCAGgtaggacacc ... cttcctgtagATGAAAGAAACTGTATCTGC-TGATGCTAAAAAAGAAAAG
EST: AGCTCATTCTGCCTCACACTTCTTCCATGGCCACAGAAACAGCTAGCCAG ATGAAAGAAACTGTATCTGCTGATGCTAAAAAAGAAAAG
genomic: AGCTCATTCTGCCTCACACTTCTTCCATGGCCACAGAAACAGCTAGCCAGgtaggacacc ... cttcctgtagATGAAAGAAACTGTATCTGCTGATGCTAAAAAAGAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCCAAACTGATGGACAACCTTCAGGTGAGCAACCCACATAGGCTGATAAGCTCATTCTGCCTCACACTTCTTCCATGGCCACAGAAACAGCTAGCCAGgtaggacaccagcattttcctgtttgccaacattttattcagctttcactgatgtagctaatatatttgttgtcacttcctgtag
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