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ACCCCCACACCCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcatgctcttctcttccaccactacatgattttctttccaattccttgtttgatcctggttcttcctatggacattagtaataattgtgttgct...
species | Oryza sativa |
transcript | LOC_Os02g24430.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTG GTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGAEST: gi|88402512|gb|CI598739.1|CI598739
genomic: CCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcat ... aactgttcagGTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGA
EST: CCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTG GTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGAEST: gi|88445113|gb|CI589591.1|CI589591
genomic: CCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcat ... aactgttcagGTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGA
EST: CCAACTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTG GTCCAGATAGAGCCGAACAGTCATGACAGAAGTTCTATCAAGACCTCTTGAEST: gi|112785843|gb|EE591529.1|EE591529
genomic: CCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcat ... aactgttcagGTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGA
EST: CCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTG GTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGAEST: gi|88389044|gb|CI595278.1|CI595278
genomic: CCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcat ... aactgttcagGTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGA
EST: CTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTG GTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGA
genomic: CTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcat ... aactgttcagGTCCAGATAGAGCCGAACAGTCATGACAGAAGTCCTATCAAGACCTCTTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCCCACACCCACCTGACCACCTCCTCCCCTTCCCACATCCAGGCTCCTCCTCTTGGTGgtacgtgcatgctcttctcttccaccactacatgattttctttccaattccttgtttgatcctggttcttcctatggacattagtaataattgtgttgct
- - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccaccac