1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CCAACCCCCGCCGCCGCCACCGCCACCGCCGCCGCCGCCGCATCCTCCTCCTCGCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCAgtgagttacctctccatctctctcacctcccatatgctagggttcttgccaccgcgggatttttctcctttcttttttttgagaaattcatttgtcttct...
species | Oryza sativa |
transcript | LOC_Os02g14929.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCGCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCA AGGATTCTTTGAAGCGGGAGTCTGGCACCAAGGTGCATCATGCCAACATCCEST: gi|88334932|gb|CI648707.1|CI648707
genomic: CTCGCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCAgtgagttacc ... ggcaatgcagAGGATTCTTTGAAGCGGGAGTCTGGCACCAAGGTGCATCATGCCAACATCC
EST: CTCGCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCA AGGATTCTTTGAAGCGGGAGTCTGGCACCAAGGTGCATCATGCCAACATCC
genomic: CTCGCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCAgtgagttacc ... ggcaatgcagAGGATTCTTTGAAGCGGGAGTCTGGCACCAAGGTGCATCATGCCAACATCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAACCCCCGCCGCCGCCACCGCCACCGCCGCCGCCGCCGCATCCTCCTCCTCGCGCCTCTCGCTATCCATGGCATTGCACGCGCCGGTGCTCGTGCTCAgtgagttacctctccatctctctcacctcccatatgctagggttcttgccaccgcgggatttttctcctttcttttttttgagaaattcatttgtcttct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctctcc
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccaccgc