Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|33661540|gb|CF292507.1|CF292507EST: AGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCAC GCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGG
genomic: AGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCACgtaagttttc ... atggatgcagGCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGG
EST:
gi|11442869|gb|BF430768.1|BF430768EST: AGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCAC GCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGG
genomic: AGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCACgtaagttttc ... atggatgcagGCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGG
EST:
gi|38474972|gb|CF959105.1|CF959105EST: AGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCAC GCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGG
genomic: AGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCACgtaagttttc ... atggatgcagGCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCTGGTTAAATTTATGTTTGGTTTGGTTTGGTTTCAGCAAGGTGCTGACAGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCACgtaagttttcatgtggtaaaatttattcatgttgcaataaaagaggcgttaaggcctcatttgaaacgattttcgaagaatttttataggaatcaaccgt
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG