1 5' 3' | 2 5' 3' | 3 5' 3' |
GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcatccacctgtctcttaatttcctttcgcccaccagctttgctggcggatcaagagccttcgagttggaagtaatttggattttttttttctc...
species | Oryza sativa |
transcript | LOC_Os02g06770.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAG CTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCACEST: gi|88347687|gb|CI655040.1|CI655040
genomic: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcat ... gaactgctagCTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
EST: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAG CTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCACEST: gi|66918327|gb|CX105175.1|CX105175
genomic: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcat ... gaactgctagCTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
EST: CGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAG CTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCACEST: gi|163926082|gb|EG711810.1|EG711810
genomic: CGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcat ... gaactgctagCTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
EST: CTCTGCCCCAG CTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCACEST: gi|163925821|gb|EG709617.1|EG709617
genomic: CTCTGCCCCAGgtaccagcat ... gaactgctagCTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
EST: CTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAG CTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCACEST: gi|88307704|gb|CI644744.1|CI644744
genomic: CTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcat ... gaactgctagCTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
EST: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAG CTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
genomic: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcat ... gaactgctagCTCTGAAAGAGGGGGGCATATGGCTTCCTTATTTCGACGATCTTCGATCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcatccacctgtctcttaatttcctttcgcccaccagctttgctggcggatcaagagccttcgagttggaagtaatttggattttttttttctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cgcccac
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