Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58597792|gb|CK008320.1|CK008320EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGGAG
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGC---AGgtactctacg ... gtacaagg
EST:
gi|66915617|gb|CX102465.1|CX102465EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGGAG
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGC---AGgtactctacg ... gtacaagg
EST:
gi|88433450|gb|CI594264.1|CI594264EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAG G
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGgtactctacg ... gtacaaggag-
EST:
gi|88433450|gb|CI594264.1|CI594264EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAG G
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGgtactctacg ... gtacaaggag-
EST:
gi|58682952|gb|CK071639.1|CK071639EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGGAG
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGC---AGgtactctacg ... gtacaagg
EST:
gi|88726862|gb|CI750517.1|CI750517EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGGAG
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGC---AGgtactctacg ... gtacaagg
EST:
gi|86831953|gb|CI303393.1|CI303393EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGGAG
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGC---AGgtactctacg ... gtacaagg
EST:
gi|88350275|gb|CI623213.1|CI623213EST: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGGAG
genomic: ATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGC---AGgtactctacg ... gtacaagg
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TAGGAGAAATCCGGTGGATATCGATCGGATCCAGATGAACACTCGACTGGATTCCGGCGGACAGAAGTAAATCCGGAGTCGGTTTTTTCGTAAATCGCAGgtactctacgcaatttttgatcctaattgttatactagtagtaatacagtgggagatgtgagtaataattgctggattatttctggtttttgtacaaggag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT