1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTGCATCAGAGCAGCGAGCTCGCTCTCCATCCCCTGCGTGCCATGGGCAACTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGgtaatctagcttcttcaattcgctctcgtatatatttcaccatctagctagctgcataggacgtactaggagtagatagattcttgattcaagtaaaaaa...
species | Oryza sativa |
transcript | LOC_Os01g74200.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTG GTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCAEST: gi|88420862|gb|CI620180.1|CI620180
genomic: CTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGgtaatctagc ... tggtggtcagGTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCA
EST: CTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTG GTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCA
genomic: CTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGgtaatctagc ... tggtggtcagGTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCATCAGAGCAGCGAGCTCGCTCTCCATCCCCTGCGTGCCATGGGCAACTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGgtaatctagcttcttcaattcgctctcgtatatatttcaccatctagctagctgcataggacgtactaggagtagatagattcttgattcaagtaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agtaaaaa