Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88574933|gb|CI666702.1|CI666702EST: TACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCG GTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTT
genomic: TACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCGgtgagtttcg ... ttttgagcagGTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTT
EST:
gi|88574222|gb|CI665991.1|CI665991EST: TACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCG GTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTT
genomic: TACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCGgtgagtttcg ... ttttgagcagGTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTT
EST:
gi|88301966|gb|CI667812.1|CI667812EST: TACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCG GTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTT
genomic: TACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCGgtgagtttcg ... ttttgagcagGTCACACGGGAATTTAGAAGCTGCAACCTTTCGTCAGACGAACTGTCTGTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGAAATCTGAATCCTCAAATGGTAGCAACAAAGTAATCTCATACAGTCATACTGAAGCTTTGCTGTGGCTACGTCAGGCCGGTGACATCGGATCAGTCGgtgagtttcgtagaacaccttgcttgttcatgcctttaggttgaaggcagctctgtggcatctctacacctgaaatcgagtacatagtttattcatgttacaagtctttcttttttatgcaacttttgagcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC