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CGCGCCCACCGCCGGCGGCGGCTCTCGGCGGCAGCAGGCAGCGGCAGTGGCCTCGATCGGCGGGTTGCGCGGTCGGATCCCCAATCCCCGGGCTGCGCTGgtgagtggttttcctcagctgcttctgcttgtccccgtgcgtctccctctcttccgagccccctggttctgctctgcctgcggccggcgccgttttcccg...
species | Oryza sativa |
transcript | LOC_Os01g33040.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTCGATCGGGGGGTTGCGCGGTCGGATCCCCAATCCCCGGGCTGCGCTG CTTCGTGAGAAGGCTGGGTTCTTGCTGTTTTCCCCAGACTTCAAGGAATCTEST: gi|88372329|gb|CI619659.1|CI619659
genomic: CCTCGATCGGCGGGTTGCGCGGTCGGATCCCCAATCCCCGGGCTGCGCTGgtgagtggtt ... cttgtgccagCTTCGTGAGAAGGCTGGGTTCTTGCTGTTTTCCCCAGACTTCAAGGAATCT
EST: CCTCGATCGGCGGGTTGCGCGGTCGGATCCCCAATCCCCGGGCTGGGCTG CTTCGTGAGAAGGCTGGGTTCTTGCTGTTTTCCCCAGACTTCAAGGAATCT
genomic: CCTCGATCGGCGGGTTGCGCGGTCGGATCCCCAATCCCCGGGCTGCGCTGgtgagtggtt ... cttgtgccagCTTCGTGAGAAGGCTGGGTTCTTGCTGTTTTCCCCAGACTTCAAGGAATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCGCCCACCGCCGGCGGCGGCTCTCGGCGGCAGCAGGCAGCGGCAGTGGCCTCGATCGGCGGGTTGCGCGGTCGGATCCCCAATCCCCGGGCTGCGCTGgtgagtggttttcctcagctgcttctgcttgtccccgtgcgtctccctctcttccgagccccctggttctgctctgcctgcggccggcgccgttttcccg
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