Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88958306|gb|CI095825.1|CI095825EST: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATG AATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
genomic: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATGgtacgtacgc ... taatttgcagAATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
EST:
gi|88968042|gb|CI098284.1|CI098284EST: CGGAGAGGATGATGAGACAGATG AATCTGACGGATGAGCTTGACTGGAACTTTTCGAGTGACAAAGCTGACGAA
genomic: CGGAGAGGATGATGAGACAGATGgtacgtacgc ... taatttgcagAATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
EST:
gi|88968446|gb|CI098688.1|CI098688EST: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATG AATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
genomic: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATGgtacgtacgc ... taatttgcagAATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
EST:
gi|86484206|gb|CI126839.1|CI126839EST: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATG AATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
genomic: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATGgtacgtacgc ... taatttgcagAATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
EST:
gi|88968669|gb|CI098861.1|CI098861EST: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATG AATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
genomic: TTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATGgtacgtacgc ... taatttgcagAATCTGACGGATGAGCTTGACTTGAACTTTTCGAGTGACAAAGCTGACGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAGATGCCCCAGCTGCCGACGATGTACCACTCCTCTCGCCACGTCCGCGCTTGGGAGCTGCCACATTCGATCTGCCGCGGAGAGGATGATGAGACAGATGgtacgtacgctgcgctgttcttcacttctttgctctatctcatcgctgcatgctgatgtgctttgtccatttgtgctattcatgtttgagttattttgat
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG