Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86414225|gb|CI068628.1|CI068628EST: TGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAG ATGGGTTTCGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGTAGAGTA
genomic: TGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGgtatgttagt ... ccaactccagATGGGTTTCGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGTAGAGTA
EST:
gi|58676858|gb|CK065545.1|CK065545EST: TGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAG ATGGGTTTCGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGT
genomic: TGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGgtatgttagt ... ccaactccagATGGGTTTCGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGgtatgttagtttctctctgtatgtgttcagcaatcagcacacatttgttaatcttgacttgtggtgttcgagaaaccacccctgatttcttaacatttgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG