Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88760406|gb|CI769962.1|CI769962EST: TCATCGAGGTCTCCCAGCTTGAGGAGCACTGAAGAAATTTCTATGTTGAG CAATGGTGTCAAGAAGTCTGCAGCTTGTCGGCGCGTTGATGCTGCCGCTGC
genomic: TCATCGAGGTCTCCCAGCTTGAGGAGCACTGAAGAAATTTCTATGTTGAGgtcagtgatc ... ttttgcgcagCAATGGTGTCAAGAAGTCTGCAGCTTGTCGGCGCGTTGCTGCTGCCGCTGC
EST:
gi|88745596|gb|CI768956.1|CI768956EST: TCATCGAGGTCTCCCAGCTTGAGGAGCACTGAAGAAATTTCTATGTTGAG CAATGGTGTCAAGAAGTCTGCAGCTTGTCGGCGCGTTGCTGCTGCCGCTGC
genomic: TCATCGAGGTCTCCCAGCTTGAGGAGCACTGAAGAAATTTCTATGTTGAGgtcagtgatc ... ttttgcgcagCAATGGTGTCAAGAAGTCTGCAGCTTGTCGGCGCGTTGCTGCTGCCGCTGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTACTAGAGCCGTCCTTGGTGAACAGTTCTTCGACACTCACCTCACTCTCATCGAGGTCTCCCAGCTTGAGGAGCACTGAAGAAATTTCTATGTTGAGgtcagtgatctgatcatctgatcatgcaagctgaacaggattagttagatatgctgcagaaattttattagattttttgcattcttctgcaagtgttact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA