Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58664808|gb|CK053494.1|CK053494EST: GGCCACCAAGAAGAACACCGGCAACTGGCGTGCCTGCCCCTACATCCTCG CTAACGAGTGCTGCGAGAGGCTGGCCTACTATGGCATGAGCACCAACCTCG
genomic: GGCCACCAAGAAGAACACCGGCAACTGGCGTGCCTGCCCCTACATCCTCGgtaagtaaca ... gtttgatcagCTAACGAGTGCTGCGAGAGGCTGGCCTACTATGGCATGAGCACCAACCTCG
EST:
gi|88314293|gb|CI602625.1|CI602625EST: GGCCACCAAGAACAACACCGGCAACTGGCGTGCCTGCCCCTACATCCTCG CTAACGAGTGCTGCGAGAGGCTGGCCTACTATGGCATGAGCACCAACCTCG
genomic: GGCCACCAAGAAGAACACCGGCAACTGGCGTGCCTGCCCCTACATCCTCGgtaagtaaca ... gtttgatcagCTAACGAGTGCTGCGAGAGGCTGGCCTACTATGGCATGAGCACCAACCTCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCAGAAGACATCTACACCCAAGATGGCACCGTGGACGTCAAGGGCAACCCGGCCACCAAGAAGAACACCGGCAACTGGCGTGCCTGCCCCTACATCCTCGgtaagtaacaacatcttcctcgtcgattgccaagcttgttcgtctccattgatggtgagatataagcgagtgaagtgactgatgtttgcaatggtttgatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC