1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATTTCAAGGATGACCCCGACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaacttttcattttaacatcgcaatatttggtttgatacttttggatctgaactctgacaagcaggctattttatcttacag
species | Glycine max |
transcript | GLYMA20G23080.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAG GTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTEST: gi|7147510|gb|AW509432.1|AW509432
genomic: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATT
EST: CTATATGTNTTTCCC-AACTTGAAGTACGTGGGCATTGAATTGGTGG-AG GTGAAATCTGGTACTTTGGTTGACAATGGCTTAATTACEST: gi|5606713|gb|AI900811.1|AI900811
genomic: CTATATGT-TTTCCCCAACTTGAAGTACGTGGGCATTGAATTG-TGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTAC
EST: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAG GTGAAATCTGGTACTTTGGTTGACAATGTCTTAATTEST: gi|193341174|gb|FK306414.1|FK306414
genomic: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATT
EST: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAG GTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAAEST: gi|193622041|gb|FK570453.1|FK570453
genomic: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAA
EST: CAACTTGAAGTACGTGGGCATTGAATTGTGGCAG GTGAAATCTGGCACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAAEST: gi|208317285|gb|GE117494.1|GE117494
genomic: CAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAA
EST: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAG GTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAAEST: gi|208091443|gb|GD886338.1|GD886338
genomic: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAA
EST: ACCTATATGTTTTCCCCAACTTGAAGTATGTGGGCATTGAATTGTGGCAG GTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAAEST: gi|26045988|gb|CA783372.1|CA783372
genomic: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAA
EST: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGGAG GTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAA
genomic: ACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaactttt ... tatcttacagGTGAAATCTGGTACTTTGTTTGACAATGTCTTAATTACTGATGATCCTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTCAAGGATGACCCCGACCTATATGTTTTCCCCAACTTGAAGTACGTGGGCATTGAATTGTGGCAGgtaaacttttcattttaacatcgcaatatttggtttgatacttttggatctgaactctgacaagcaggctattttatcttacag
- - - - - - - - - - - - - - - - - - - TTGAAG