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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTCGGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACTTGTAATGGGAACCTTTGGgtaggttccttgtctataatgtagcttgtgtcatataatttagtgtttattaacagaatcctattattggcccttaaattttactgtgttcagactatct...

Basic information

species Glycine max
transcript GLYMA20G20300.1
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G20300.1 (Glycine max), 5'ss of exon 9
lower sequence: Vv14s0083g00330.t01 (Vitis vinifera), 5'ss of exon 5
GTTTCGGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACTTGTAATGGGAACCTTTGGgtaggttccttgtctataatgtagcttgtgtcatata-atttagtgtttattaaca---gaatcctattattggcccttaaattttactgtgttcagactatct
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GTTTCAGATTTTGGGCTTGCAAAGTTAGCATTGGATGCCAATACACATGTAACCACTCGTGTGATGGGAACCTTTGGgtaggtaa-tcatgtgtagtcttttttatctcctaaagaattaaggtgaaggtatttttgaatttttctgtgtgctctatagctttgttaaatattgatgc---