1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGAATGGAGGGCTTTGATGGATGAGATGGCTGTCATTGCCACTGAGGAGTACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcctacagaaattggttaaatatgtttttacttcttataaatatggtgaattttgattttagttcgggtaaaatgttttttgttggttttggt...
species | Glycine max |
transcript | GLYMA20G09810.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTG GCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCAEST: gi|16346039|gb|BI971634.1|BI971634
genomic: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcc ... tgaaatgcagGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
EST: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTG GCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCAEST: gi|23727633|gb|BU761850.1|BU761850
genomic: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcc ... tgaaatgcagGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
EST: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTG GCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCAEST: gi|151398094|gb|EV267972.1|EV267972
genomic: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcc ... tgaaatgcagGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
EST: CGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTG GCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCAEST: gi|51344741|gb|CO985474.1|CO985474
genomic: CGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcc ... tgaaatgcagGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
EST: GATTTGTTGAGTATTTCCGCCTG GCCACANNTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCAEST: gi|13252382|gb|BG363285.1|BG363285
genomic: GATTTGTTGAGTATTTCCGCCTGgtaaggttcc ... tgaaatgcagGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
EST: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTG GCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
genomic: ACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcc ... tgaaatgcagGCCACACCTGAGTTGGAGTACGGGAGGATGAACATTGGAAGTCGACCAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAATGGAGGGCTTTGATGGATGAGATGGCTGTCATTGCCACTGAGGAGTACCGGTCCATTGTGTTCAAAGAACCACGATTTGTTGAGTATTTCCGCCTGgtaaggttcctacagaaattggttaaatatgtttttacttcttataaatatggtgaattttgattttagttcgggtaaaatgttttttgttggttttggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC