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TTGCTTTCTTGATCTTGCGTTAAACTATGAACCTCCAGAGTCCCTTGTAAAATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtctttttttctttgattatatatatatttttttccacatattgtttctacatgctaataaacctaactgtaggaactttgactctttagcctgcc...
species | Glycine max |
transcript | GLYMA18G28130.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTG CCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAGEST: gi|9204101|gb|BE330325.1|BE330325
genomic: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtcttt ... cctattttagCCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAG
EST: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTG CCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAGEST: gi|6566103|gb|AW233863.1|AW233863
genomic: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtcttt ... cctattttagCCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAG
EST: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTG CCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAGEST: gi|22525050|gb|BU083861.1|BU083861
genomic: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtcttt ... cctattttagCCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAG
EST: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTG CCTGTTCAAGAACCAAAAAAGATGACACAAEST: gi|51338437|gb|CO982303.1|CO982303
genomic: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtcttt ... cctattttagCCTGTTCAAGAACCAAAAAAGATGACACAA
EST: ATTGGATTTGGTAGCCTG CCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAGEST: gi|58017155|gb|CX703897.1|CX703897
genomic: ATTGGATTTGGTAGCCTGgtgagtcttt ... cctattttagCCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAG
EST: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTG CCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAG
genomic: AATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtcttt ... cctattttagCCTGTTCAAGAACCAAAAAAGATGACACAAATAATTGTAGATGCTTTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCTTTCTTGATCTTGCGTTAAACTATGAACCTCCAGAGTCCCTTGTAAAATGGCTTGAAGAAGGAGACAAACCTATTTACATTGGATTTGGTAGCCTGgtgagtctttttttctttgattatatatatatttttttccacatattgtttctacatgctaataaacctaactgtaggaactttgactctttagcctgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA