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TCATAATTACAAGTATAAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaatgctgcttataatgcttttgttgattgtcatatttttgtttctaatttcagatatgtgatatgaaactttggtttttaaccatgccgaatg...
species | Glycine max |
transcript | GLYMA18G04360.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TCATTGGCAGTCATCAAAAAGAAAAGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATTEST: gi|22929873|gb|BU547012.1|BU547012
genomic: TCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATTEST: gi|207686936|gb|GD670464.1|GD670464
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAATGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATTEST: gi|193510785|gb|FK471259.1|FK471259
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATTEST: gi|193616966|gb|FK571636.1|FK571636
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTEST: gi|208102897|gb|GD900887.1|GD900887
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAATGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATTEST: gi|22541669|gb|BU091512.1|BU091512
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATTEST: gi|192332258|gb|FK023907.1|FK023907
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
EST: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGG GAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
genomic: AAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaat ... gtccaacaggGAGAGCCTCCCAGACAATTTAAGATTGTTATTCCAAAAATACCAGCTTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCATAATTACAAGTATAAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGtgaaataaatgctgcttataatgcttttgttgattgtcatatttttgtttctaatttcagatatgtgatatgaaactttggtttttaaccatgccgaatg
- - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA