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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACTTGTGGAATGCATCTTCTGGTGGCGCTGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacctctgttgtttttttaagaaattgttctgaacacgttttgctttgtgtgatgattattttacatccttatgcgtaattgcgtatactaata...

Basic information

species Glycine max
transcript GLYMA16G25600.2
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151402272|gb|EV272085.1|EV272085
EST:     ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTAGTGATCAATGGGTACAA                         GATGAACGTGAGCTGAAAAGACAGAAGGGGAAACAGTCAAACCGAGAGTCA
genomic: ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacc ... attttggtagGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
EST: gi|23064117|gb|BU578890.1|BU578890
EST:     ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAA                         GATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
genomic: ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacc ... attttggtagGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
EST: gi|20448522|gb|BQ252646.1|BQ252646
EST:     ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAA                         GATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
genomic: ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacc ... attttggtagGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
EST: gi|9565806|gb|BE475315.1|BE475315
EST:     ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAA                         GATGAACGTGAGCTGAAAAGACAGAAGAAGAA-CAGTCAAACCGAGAGT
genomic: ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacc ... attttggtagGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGT
EST: gi|254333244|gb|GR850494.1|GR850494
EST:     ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAA                         GATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
genomic: ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacc ... attttggtagGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
EST: gi|22523727|gb|BU082538.1|BU082538
EST:     ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAA                         GATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA
genomic: ATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAgtatgacacc ... attttggtagGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCA