1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACAGAAGCTATGAAGCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttacctcctctctctaatgtaactattttgtttgtcttggcacgtttgtgttctgagttgaccattaaattttgaattttgttgtatctgagaa...
species | Glycine max |
transcript | GLYMA15G17830.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCEST: gi|10237804|gb|BE806692.1|BE806692
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGNCATTGATGTTCEST: gi|57574980|gb|CX547955.1|CX547955
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCEST: gi|33390055|gb|CA853262.1|CA853262
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCEST: gi|14990293|gb|BI315966.1|BI315966
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCEST: gi|58016897|gb|CX703639.1|CX703639
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCEST: gi|13789463|gb|BG652054.1|BG652054
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTCEST: gi|15663109|gb|BI700480.1|BI700480
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
EST: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAG GATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
genomic: ACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttac ... cattttgcagGATACGAGGATTATCTAGGGTTCTTGTGCACAACACCTGGCATTGATGTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGAAGCTATGAAGCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGACACGTTAATCCCAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGgtttgtttacctcctctctctaatgtaactattttgtttgtcttggcacgtttgtgttctgagttgaccattaaattttgaattttgttgtatctgagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctc