1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GGAGGCCTTAAAACAAGGAAAGGTATCCAAACCGGTTGTTGCCTGGGTCAGTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctcagctcctttaactttgactaaattctcaattaaagcataaaccataaaaggacaacattcttaatgtctgttggctcttgcataaatcag
species | Glycine max |
transcript | GLYMA15G15020.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CGACTCTTCAAATCTGAAGTACAATTTGGTCATGCA GGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCAEST: gi|208168236|gb|GD972566.1|GD972566
genomic: CGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctca ... cataaatcagGGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCA
EST: GTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCA GGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCAEST: gi|17022054|gb|BM093088.1|BM093088
genomic: GTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctca ... cataaatcagGGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCA
EST: GTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCA GGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCAEST: gi|192305109|gb|FG994659.1|FG994659
genomic: GTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctca ... cataaatcagGGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCA
EST: GTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCA GGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCAEST: gi|8283130|gb|BE020691.1|BE020691
genomic: GTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctca ... cataaatcagGGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCA
EST: GGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCA GGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCA
genomic: GGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctca ... cataaatcagGGAGCCAAAAGTGGTGGTGAGTTAGAGTCTGCTCAAGCAAAGAATCAGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGCCTTAAAACAAGGAAAGGTATCCAAACCGGTTGTTGCCTGGGTCAGTGGCACATGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCAgtatgtctcagctcctttaactttgactaaattctcaattaaagcataaaccataaaaggacaacattcttaatgtctgttggctcttgcataaatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG