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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAGgtgagcattctggataatgcgtttggaaacatcaatttctctttactctcattcttgttatccatgggaccag

Basic information

species Glycine max
transcript GLYMA15G12780.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7233280|gb|AW568628.1|AW568628
EST:     GATGATTATTTGGATTGTTTTGGTGATCCTCANACAATTGGANAG                         ATAGGTACAGATATTGAAGAT
genomic: GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAGgtgagcattc ... atgggaccagATAGGTACAGATATTGAAGAT
EST: gi|7926518|gb|AW832544.1|AW832544
EST:     GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAG                         ATAGGTACAGATATTGAAGATTTCAAGTGCTCTTGGTTAGTTGTGAAAGCC
genomic: GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAGgtgagcattc ... atgggaccagATAGGTACAGATATTGAAGATTTCAAGTGCTCTTGGTTAGTTGTGAAAGCC
EST: gi|9565120|gb|BE474629.1|BE474629
EST:     GATGATTATTTGGATTGTTNTGGTGATCCTCAAACAATTGGAAAG                         ATAGGTACAGATATTGAAGATTTCAAGTGCTCTTGGTTAGTTGTGAAAGCC
genomic: GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAGgtgagcattc ... atgggaccagATAGGTACAGATATTGAAGATTTCAAGTGCTCTTGGTTAGTTGTGAAAGCC
EST: gi|193615774|gb|FK561987.1|FK561987
EST:     GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAG                         ATAGGTACAGATATTGAAGATTTCAAGTGCTCTTGGTTAGTTGTGAAAG
genomic: GATGATTATTTGGATTGTTTTGGTGATCCTCAAACAATTGGAAAGgtgagcattc ... atgggaccagATAGGTACAGATATTGAAGATTTCAAGTGCTCTTGGTTAGTTGTGAAAG