1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GAACAACAATATCACCTTGGATTGTGACCTTGGAAGCATTAGAACCTTTTGCTTGCGAAGCCCCAAAACAGgtaactggtttctttctttcgagattgacattgtaggaactttataatttggttgttcatgtctaaagttcaaattaaccttagcacgttatttacattatccataaaatgcag
species | Glycine max |
transcript | GLYMA15G12100.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TTGTGACCTTGGAAGCATTAGAACCTTTTGCTTGCGAAGCCCCAAAACAG GATCCTCCTCCACTTCCATACTTGACTGAAAAAGTATCCAGAATCTATGATEST: gi|58015544|gb|CX702286.1|CX702286
genomic: TTGTGACCTTGGAAGCATTAGAACCTTTTGCTTGCGAAGCCCCAAAACAGgtaactggtt ... taaaatgcagGATCCTCCTCCACTTCCATACTTGACTGAAAAAGTATCCAGAATCTATGAT
EST: GCCCCAAAACAG GATCCTCCTCCACTTCCATACTTGACTGAAAAAGTATCCAGAATCTATGAT
genomic: GCCCCAAAACAGgtaactggtt ... taaaatgcagGATCCTCCTCCACTTCCATACTTGACTGAAAAAGTATCCAGAATCTATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACAACAATATCACCTTGGATTGTGACCTTGGAAGCATTAGAACCTTTTGCTTGCGAAGCCCCAAAACAGgtaactggtttctttctttcgagattgacattgtaggaactttataatttggttgttcatgtctaaagttcaaattaaccttagcacgttatttacattatccataaaatgcag
- - - - - - - - - - - - - - - TGGAAG