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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGAAAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgattgactttcgtatatattttgccccttctctgtctcccttttgttcttcttatctatggtatacacatggctgacattctctgataaagag...

Basic information

species Glycine max
transcript GLYMA15G10940.2
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208169113|gb|GD971778.1|GD971778
EST:     TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG                         GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACA
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACA
EST: gi|208281278|gb|GE073706.1|GE073706
EST:     TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG                         GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG
EST: gi|193511261|gb|FK468474.1|FK468474
EST:     TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG                         GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAAC
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAAC
EST: gi|193720858|gb|FK659022.1|FK659022
EST:     TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG                         GTGTTGCTGCAAGGCCCTGAAAGGTTGTT
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTT
EST: gi|193348349|gb|FK309557.1|FK309557
EST:     TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG                         GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG