1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGAAAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgattgactttcgtatatattttgccccttctctgtctcccttttgttcttcttatctatggtatacacatggctgacattctctgataaagag...
species | Glycine max |
transcript | GLYMA15G10940.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACAEST: gi|208281278|gb|GE073706.1|GE073706
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACA
EST: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGEST: gi|193511261|gb|FK468474.1|FK468474
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG
EST: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACEST: gi|193720858|gb|FK659022.1|FK659022
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAAC
EST: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG GTGTTGCTGCAAGGCCCTGAAAGGTTGTTEST: gi|193348349|gb|FK309557.1|FK309557
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTT
EST: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAG GTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG
genomic: TGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgat ... ctttctgtagGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGAAAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGgtgtgatgattgactttcgtatatattttgccccttctctgtctcccttttgttcttcttatctatggtatacacatggctgacattctctgataaagag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gataaaga