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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATCAAGTATGTTCCAGTTCCTATGGTGCTGCAAAGTGAAAGGTTTCTTTTTCGGCGAGTCTGCCCCAAAAGCTACCATATATTTCGTTGTATCGCCAGgtattctcacattttctttgtgtgtagtattagatcagtggtgattcaaacctttacattcattctaggtggtctaaggaaaagttgaatggattcttaa...

Basic information

species Glycine max
transcript GLYMA15G05880.1
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G05880.1 (Glycine max), 5'ss of exon 9
lower sequence: Vv12s0142g00170.t01 (Vitis vinifera), 5'ss of exon 6
GTATCAAGTATGTTCCAGTTCCTATGGTGCTGCAAAGTGAAAGGTTTCTTTTTCGGCGAGTCTGCCCCAAAAGCTACCATATATTTCGTTGTATCGCCAGgtattc-tcacattttctttgtgtgtagt-attagatcagtggtgattcaaa-----cctttacattcattctaggtggtctaaggaaaagttgaatggattcttaa
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GCATAAAGTATGTTCCAGTTCCTGTAGTGCCTCAGAGTGAAAGGTTCCTTTTCCGCAGAGTCTGCCCAAAAAGCTACCACATATTTCGCTGCATTGCCAGgtagcagtctcattcttgcaagttgtccttgttacatatgtggaattgcatgagattcattgtcatcaatcatgcctgctatagacaccaattggtggaa-------