1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGCTTTAATGGAGCTGATCTTCGAAATGTGTGCACGGAAGCTGGAATGGCAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctttctttgaggaaagctatttttctgtgtatcaattatgtacaaagggattactcctcgttgctcataggcacaacaatttgacttccttctttggttcccag
species | Glycine max |
transcript | GLYMA14G07750.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAG GCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTACEST: gi|193523096|gb|FK479511.1|FK479511
genomic: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctt ... tggttcccagGCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
EST: GATTATGTGATCCATGAAGATTTTATGAAG GCTGTTAGAAAACCGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTACEST: gi|57574105|gb|CX547080.1|CX547080
genomic: GATTATGTGATCCATGAAGATTTTATGAAGgtgagttctt ... tggttcccagGCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
EST: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAG GCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTACEST: gi|15664798|gb|BI702177.1|BI702177
genomic: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctt ... tggttcccagGCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
EST: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAG GCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTACEST: gi|31467046|gb|CD409074.1|CD409074
genomic: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctt ... tggttcccagGCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
EST: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAG GCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTACEST: gi|192308351|gb|FK001337.1|FK001337
genomic: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctt ... tggttcccagGCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
EST: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAG GCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
genomic: CAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctt ... tggttcccagGCTGTTAGAAAACTGAATGATGCAAAGAAACTTGAATCCAGTGCTCACTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTTTAATGGAGCTGATCTTCGAAATGTGTGCACGGAAGCTGGAATGGCAGCAATTCGTGCAGAACGCGATTATGTGATCCATGAAGATTTTATGAAGgtgagttctttctttgaggaaagctatttttctgtgtatcaattatgtacaaagggattactcctcgttgctcataggcacaacaatttgacttccttctttggttcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA