1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATTCCCGGTGTTCCAATAATGTACATCACCAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactcttatttagtgaaatttatagtgactaacatgaatttgaacttggtttgttggacaacgcaacattgcatagctctttttagaaactagat...
species | Glycine max |
transcript | GLYMA13G38690.2 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAG CTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACAEST: gi|254345717|gb|GR859364.1|GR859364
genomic: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactc ... ctcaatgcagCTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
EST: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAG CTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACAEST: gi|58020255|gb|CX706997.1|CX706997
genomic: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactc ... ctcaatgcagCTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
EST: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAG CTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACAEST: gi|58020043|gb|CX706785.1|CX706785
genomic: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactc ... ctcaatgcagCTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
EST: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAG CTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACAEST: gi|31461524|gb|CD403552.1|CD403552
genomic: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactc ... ctcaatgcagCTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
EST: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAG CTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACAEST: gi|51337561|gb|CO981427.1|CO981427
genomic: CAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactc ... ctcaatgcagCTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
EST: GCAACAATTGGTGGAG CTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
genomic: GCAACAATTGGTGGAGgtagatactc ... ctcaatgcagCTCCAAGAATTTGATGCAGTAAAACTAAAACAGGCAGAGCTGGCTATAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCCCGGTGTTCCAATAATGTACATCACCAAACGCAAGTACTCGATTGAGCGATTGCCTGAAGCAACAATTGGTGGAGgtagatactcttatttagtgaaatttatagtgactaacatgaatttgaacttggtttgttggacaacgcaacattgcatagctctttttagaaactagat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG