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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATATTCCACAAAAAGATGCCTCCAGAAGCAATTGATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCGgttagtgtggttgcatttttttttttccactttctgtattccaactaatttagtattacattatttgacatcaccttatgattctcctgaatttaattaatcaatgagtgttctatagaaatactagcacagcaatttgaaaagagtctttttttgttatgcag

Basic information

species Glycine max
transcript GLYMA13G30060.3
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15199982|gb|BI424109.1|BI424109
EST:     ATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCG                         CTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCT
genomic: ATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCGgttagtgtgg ... tgttatgcagCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCT
EST: gi|14991336|gb|BI317009.1|BI317009
EST:     ATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCG                         CTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCT
genomic: ATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCGgttagtgtgg ... tgttatgcagCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCT