1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CTTCACATAGGATTCTGCATCTTAGCTGCAGTTGCTCCTCCTATAGTTTTCAAAGGCAAATCCCTGACgtacggcaatttcatatatgttctctatttaacatgctaatattactcatatggctttatttttgtcacaagaagactaagctttcaaattcattttctt...
species | Glycine max |
transcript | GLYMA13G25460.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ATCTTAGCTGCAGTTGCTCCTCCTATAGTTTTCAAAGGCAAATCCCTGAC GGGCATTCTGGCTGCCATAGATGTGCTGGGCGACCATGCTTTGATTGGGAEST: gi|7589230|gb|AW705008.1|AW705008
genomic: ATCTTAGCTGCAGTTGCTCCTCCTATAGTTTTCAAAGGCAAATCCCTGACgtacggcaat ... attgatacagGGGCATTCTGGCTGCCATAGATGTGCTGGGCGACCATGCTTTGATTGGGA
EST: ATCTTAGCTGCAGTTGCTCCTCCTATAGTTTTCAAAGGCAAATCCCTGAC GGGCATTCTGGCTGCCATAGATGTGCTGGGCGACCATGCTTTGATTGGG
genomic: ATCTTAGCTGCAGTTGCTCCTCCTATAGTTTTCAAAGGCAAATCCCTGACgtacggcaat ... attgatacagGGGCATTCTGGCTGCCATAGATGTGCTGGGCGACCATGCTTTGATTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTCACATAGGATTCTGCATCTTAGCTGCAGTTGCTCCTCCTATAGTTTTCAAAGGCAAATCCCTGACgtacggcaatttcatatatgttctctatttaacatgctaatattactcatatggctttatttttgtcacaagaagactaagctttcaaattcattttctt
- - - - - - - - - - - AGCTGC
- - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - CTCCTC