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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAATTGGAAATCAGGCAAAATTTTGCTCAATCAGACAGTTGTTCCAGCTTCTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAGgtaactgtgacattgttttatgggcaatggcatttcatttagctaaatattcatcttaaataccttttagagtaagaatcatcataatctgggaaagatt...

Basic information

species Glycine max
transcript GLYMA12G05980.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7693350|gb|AW761444.1|AW761444
EST:     CTTCATCAGATCCTTACCTACAAGTCACATTTACATTTTCTCCTGTTGAG                         AATACTTTGTCTACATTGAACTTTCGACTACCAAATTGGACTCTTCTGGAT
genomic: CTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAGgtaactgtga ... acttctgcagAATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGAT
EST: gi|207796582|gb|GD770744.1|GD770744
EST:     CTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAG                         AATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGAT
genomic: CTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAGgtaactgtga ... acttctgcagAATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGAT
EST: gi|193478232|gb|FK445369.1|FK445369
EST:     CTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAG                         AATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGAT
genomic: CTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAGgtaactgtga ... acttctgcagAATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGAT