1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CAATGTAGTAGAGAAATGTTTGACCTTTGGAGGTCCTTCTGAGCGCCAATTACTAGTGAATGAGATGCTTGGCACCACCGATGAAAATGAGCCTCTTCAGgtttgttaaactttctcttcctaatatatgcctttccctttctttattggagcaaattagaataccatcataaatgatcagtaatggtcttcttcatgat...
species | Glycine max |
transcript | GLYMA11G14500.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TACTAGTGAGTGAGATGCTTGGGACCACCGATGAAAATGAGCCTCTTCAG GCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAAEST: gi|207757155|gb|GD730113.1|GD730113
genomic: TACTAGTGAATGAGATGCTTGGCACCACCGATGAAAATGAGCCTCTTCAGgtttgttaaa ... ttatatgcagGCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAA
EST: TACTAGTGAGTGAGATGCTTGGGACCACCGATGAAAATGAGCCTCTTCAG GCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAAEST: gi|6725243|gb|AW309642.1|AW309642
genomic: TACTAGTGAATGAGATGCTTGGCACCACCGATGAAAATGAGCCTCTTCAGgtttgttaaa ... ttatatgcagGCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAA
EST: GAAAATGAGCCTCTTCAG GCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAAEST: gi|207797564|gb|GD769388.1|GD769388
genomic: GAAAATGAGCCTCTTCAGgtttgttaaa ... ttatatgcagGCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAA
EST: CCGATGAAAATGAGCCTCTTCAG GCGTATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGA
genomic: CCGATGAAAATGAGCCTCTTCAGgtttgttaaa ... ttatatgcagGCG-ATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATGTAGTAGAGAAATGTTTGACCTTTGGAGGTCCTTCTGAGCGCCAATTACTAGTGAATGAGATGCTTGGCACCACCGATGAAAATGAGCCTCTTCAGgtttgttaaactttctcttcctaatatatgcctttccctttctttattggagcaaattagaataccatcataaatgatcagtaatggtcttcttcatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctttccc