1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATGATTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACTTACCATAGTTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACGGgtgtgcatttattttgtttagatactttccaaactgcaacaaactgcacaattttcttggtcaactcaactatactcttatcggtcatttattctaaaaaaaatatttggtttatag
species | Glycine max |
transcript | GLYMA11G14000.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CTATGGAACGG GAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGEST: gi|11687556|gb|BF595232.1|BF595232
genomic: CTATGGAACGGgtgtgcattt ... tggtttatagGAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAG
EST: CCATAGTTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACGG GAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAG
genomic: CCATAGTTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACGGgtgtgcattt ... tggtttatagGAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGATTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACTTACCATAGTTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACGGgtgtgcatttattttgtttagatactttccaaactgcaacaaactgcacaattttcttggtcaactcaactatactcttatcggtcatttattctaaaaaaaatatttggtttatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT