1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgctcaacacttcctttttattgtctcacattttaaatgcattgggggttcttggtagataatatgcatgtttttctgtactccttatttatt...
species | Glycine max |
transcript | GLYMA10G34370.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAG AGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGTGCAACAGCTEST: gi|22524365|gb|BU083176.1|BU083176
genomic: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgc ... ttttttgcagAGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGTGCAACAGCT
EST: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAG AGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGTGCAACAGCTEST: gi|9899914|gb|BE608882.1|BE608882
genomic: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgc ... ttttttgcagAGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGTGCAACAGCT
EST: TGTTTTGGGTTTTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAG AGCAAAAGGTCATGCTTTCCAAAACTGGATGCCATTAAAAGTEST: gi|9564018|gb|BE473527.1|BE473527
genomic: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgc ... ttttttgcagAGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGT
EST: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAG AGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGTGCAACAGCTEST: gi|6916528|gb|AW398058.1|AW398058
genomic: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgc ... ttttttgcagAGCAAAAGGTCGTGCTTTCCAAAACTGGATGCCATTAAAAGTGCAACAGCT
EST: TGTTNTGGGTTTTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAG AGCAAAAGGTCATGCT
genomic: TGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgc ... ttttttgcagAGCAAAAGGTCGTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGAGGCTCATACACTACTTCAGgtgactatgctcaacacttcctttttattgtctcacattttaaatgcattgggggttcttggtagataatatgcatgtttttctgtactccttatttatt
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