1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGgttagtaggttactctttgcttttgtatttattccttattgtgttaacaatcttcaataccttagtgtcatttacgcaatgccag
species | Glycine max |
transcript | GLYMA10G30220.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTG CTTGTGATGTCCCTGGAATTAAGAGATTACTTCCATCAGAGTGGAGGGAACEST: gi|17519083|gb|BM188125.1|BM188125
genomic: GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGgttagtaggt ... gcaatgccagCTTGTGATGTCCCTGGAATTAAGAGATTACTTCCATCAGAGTGGAGGGAAC
EST: GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTG CTTGTGATGTCCCTGGAATTAAGAGATTACTTCCATCAGAGTGGAGGGAACEST: gi|151411529|gb|EV281340.1|EV281340
genomic: GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGgttagtaggt ... gcaatgccagCTTGTGATGTCCCTGGAATTAAGAGATTACTTCCATCAGAGTGGAGGGAAC
EST: GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTG CTTGTGATGTCCCTGGAATTAAGAGATTACTTCCATCAGAGTGGAGGGAAC
genomic: GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGgttagtaggt ... gcaatgccagCTTGTGATGTCCCTGGAATTAAGAGATTACTTCCATCAGAGTGGAGGGAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCACTGCCAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGgttagtaggttactctttgcttttgtatttattccttattgtgttaacaatcttcaataccttagtgtcatttacgcaatgccag
- - - - AAGAAA
- - - - - - - - - - - AAGCTG
- - - - - - - - - - - AGCTGA
- - - - - - - - - - - - GCTGAT