1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TCCGCATTTGATTGCTTTAGCTTGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattccactgtatttctaagcacttgtttgttgcatcttaaattaagtttcttacactgtcactttctcctctctctctctctcttttttttttc...
species | Glycine max |
transcript | GLYMA08G46170.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTG GTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGEST: gi|16343443|gb|BI969038.1|BI969038
genomic: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattc ... attttgacagGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
EST: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTG GTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGEST: gi|21256573|gb|BQ453461.1|BQ453461
genomic: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattc ... attttgacagGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
EST: AGAAAGACACCACTGCTTGGTTTGAAGAATTTTTTGTTGATATGAATGTG GTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGEST: gi|193589327|gb|FK545051.1|FK545051
genomic: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattc ... attttgacagGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
EST: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTG GTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGEST: gi|193542095|gb|FK496207.1|FK496207
genomic: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattc ... attttgacagGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
EST: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTG GTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGEST: gi|6725826|gb|AW310225.1|AW310225
genomic: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattc ... attttgacagGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
EST: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTG GTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
genomic: AGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattc ... attttgacagGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCGCATTTGATTGCTTTAGCTTGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGgtgagtattccactgtatttctaagcacttgtttgttgcatcttaaattaagtttcttacactgtcactttctcctctctctctctctcttttttttttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC