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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAGCTTATTTCGGAAAGCCTATCTGCTACAAATAAGCAGGATGCTTCTGGCAACAAGTTATTTCTAGATGTCGGTCTGTGGTTATCACAGAAGATTAAGgtaaaacgtcaggaataatgctcctgaagtatgtatttttttatctaacaacttgtttttcttgcactatggttaataattttgaagtatgttacttcca...

Basic information

species Glycine max
transcript GLYMA08G21370.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209712326|gb|BW671176.1|BW671176
EST:     GCAACAAGTTATTTCTAGTTGTCGGTCTGTGGTTATCACAGAAGATTAAG                         GACCACTTCACAAAAAGTCGAAAGATGGATATAACTCTGAAGTACATTG
genomic: GCAACAAGTTATTTCTAGATGTCGGTCTGTGGTTATCACAGAAGATTAAGgtaaaacgtc ... tctgttgtagGACCACTTCACAAAAAGTCGAAAGATGGATATAACTCTGAAGTACATTG
EST: gi|209712325|gb|BW671175.1|BW671175
EST:     GCAACAAGTTATTTCTAGTTGTCGGTCTGTGGTTATCACAGAAGATTAAG                         GACCACTTCACAAAAAGTCGAAAGATGGATATAACTCTGAAGTACATTG
genomic: GCAACAAGTTATTTCTAGATGTCGGTCTGTGGTTATCACAGAAGATTAAGgtaaaacgtc ... tctgttgtagGACCACTTCACAAAAAGTCGAAAGATGGATATAACTCTGAAGTACATTG